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  1. Records
  2. Empty LNP (no siRNA) constant pH MD at pH 11
  3. Experiments
  4. r_1/pH_11.00_r_1
  5. Overview
MD-A00C6H

Empty LNP (no siRNA) constant pH MD at pH 11

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  • r_1/pH_11.00_r_1
  • r_2/pH_11.00_r_2
OverviewTrajectory viewerAnalyses

Force Field & Water Model

Force field
  • CHARMM36
Water modelTIP3P

Simulation Parameters

Frames
83
Frequency
N/A
Simulation length
N/A
Timestep
2 fs
Temperature
300 K
Ensemble
NPT

Simulation Box

Box type
  • cubic
X
159.887 nm
Y
159.887 nm
Z
159.887 nm
Box volume
4,087,327.66 nm³

System Composition

Total system
66,204atoms600residues
Protein
0atoms0residues
Nucleic acids
0atoms0residues
Lipids
25,392atoms288residues
Carbohydrates
0atoms0residues
Solvent
0atoms0residues

Counter-Ions

Cations (+)
0
Anions (-)
0
Total ions
0