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stalk_LNP_endosome_AA_reorientedRNA | LNP-endosome stalk system: unbiased MD with all MC3 protonated and reoriented siRNA | MDRepo
Records
LNP-endosome stalk system: unbiased MD with all MC3 protonated and reoriented siRNA
Experiments
stalk_LNP_endosome_AA_reorientedRNA
Overview
MD-A00C6F
LNP-endosome stalk system: unbiased MD with all MC3 protonated and reoriented siRNA
Back to record
Overview
Trajectory viewer
Analyses
Force Field & Water Model
Force field
CHARMM36
Water model
TIP3P
Simulation Parameters
Frames
33
Frequency
N/A
Simulation length
N/A
Timestep
2 fs
Temperature
300 K
Ensemble
NPT
Simulation Box
Box type
cubic
X
398.511 nm
Y
398.454 nm
Z
398.454 nm
Box volume
63,269,792.69 nm³
System Composition
Total system
936,847
atoms
7,969
residues
Protein
0
atoms
0
residues
Nucleic acids
638
atoms
20
residues
Lipids
898,667
atoms
7,651
residues
Carbohydrates
0
atoms
0
residues
Solvent
0
atoms
Counter-Ions
Cations (+)
0
Anions (-)
0
Total ions
0
0
residues