MDRepo
Browse
Communities
My depositions
New Deposition
EN
Log in
us_10.2 | LNP-endosome siRNA translocation: umbrella sampling with constant-pH MD, window 10.2 nm | MDRepo
Records
LNP-endosome siRNA translocation: umbrella sampling with constant-pH MD, window 10.2 nm
Experiments
us_10.2
Overview
MD-A00C5Q
LNP-endosome siRNA translocation: umbrella sampling with constant-pH MD, window 10.2 nm
Back to record
Overview
Trajectory viewer
Analyses
Force Field & Water Model
Force field
CHARMM36
Water model
TIP3P
Simulation Parameters
Frames
39
Frequency
N/A
Simulation length
N/A
Timestep
2 fs
Temperature
300 K
Ensemble
NPT
Simulation Box
Box type
cubic
X
398.449 nm
Y
398.449 nm
Z
398.449 nm
Box volume
63,258,394.53 nm³
System Composition
Total system
936,853
atoms
7,969
residues
Protein
0
atoms
0
residues
Nucleic acids
638
atoms
20
residues
Lipids
898,667
atoms
7,651
residues
Carbohydrates
0
atoms
0
residues
Solvent
0
atoms
Counter-Ions
Cations (+)
0
Anions (-)
0
Total ions
0
0
residues